RID: 2MBH85WJ016 Job Title:Protein Sequence Program: BLASTP Query: unnamed protein product ID: lcl|Query_4642058(amino acid) Length: 339 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprote... Andean potat... NA 12259 706 706 100% 0.0 100.00 997 P38485.1 RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprote... Squash mosai... NA 36401 203 203 80% 2e-57 37.32 1009 P36341.3 RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprote... Bean-pod mot... NA 31715 182 182 79% 4e-50 36.36 1018 P23009.2 RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprote... Red clover m... NA 12262 171 171 94% 3e-46 32.20 996 P13561.1 RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprote... Cowpea sever... NA 31716 157 157 83% 2e-41 33.10 1002 P31630.1 RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprote... Cowpea mosai... NA 928299 115 115 78% 3e-27 30.71 1046 P03599.1 Alignments: >RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprotein M; AltName: Full=M RNA polyprotein; AltName: Full=Middle component RNA polyprotein; AltName: Full=P2; Contains: RecName: Full=VP58; Contains: RecName: Full=Movement protein; Short=MP; Contains: RecName: Full=Large capsid protein; Short=LCP; AltName: Full=Coat protein VP42; AltName: Full=L subunit; AltName: Full=Large coat protein; Contains: RecName: Full=Small capsid protein; Short=SCP; AltName: Full=Coat protein VP22; AltName: Full=S subunit [Andean potato mottle virus] Sequence ID: P38485.1 Length: 997 Range 1: 75 to 413 Score:706 bits(1822), Expect:0.0, Method:Compositional matrix adjust., Identities:339/339(100%), Positives:339/339(100%), Gaps:0/339(0%) Query 1 MEMRAEKYLNSIPANVLEDRAKAYNVSKMTSIKNQIPSGKALYQNGKSLASMIKSQFQPI 60 MEMRAEKYLNSIPANVLEDRAKAYNVSKMTSIKNQIPSGKALYQNGKSLASMIKSQFQPI Sbjct 75 MEMRAEKYLNSIPANVLEDRAKAYNVSKMTSIKNQIPSGKALYQNGKSLASMIKSQFQPI 134 Query 61 SKVLKGGEVKSYNYIPVGSFTAGEHCELAVPIMPEEELAAIVPDSDFALVTKEDNKAKSV 120 SKVLKGGEVKSYNYIPVGSFTAGEHCELAVPIMPEEELAAIVPDSDFALVTKEDNKAKSV Sbjct 135 SKVLKGGEVKSYNYIPVGSFTAGEHCELAVPIMPEEELAAIVPDSDFALVTKEDNKAKSV 194 Query 121 HVGAVEIVMECMTSPDCDIYGGAMFVDTFHEDPKNAVRALFVTQLKGGVSPRCLFFPDTQ 180 HVGAVEIVMECMTSPDCDIYGGAMFVDTFHEDPKNAVRALFVTQLKGGVSPRCLFFPDTQ Sbjct 195 HVGAVEIVMECMTSPDCDIYGGAMFVDTFHEDPKNAVRALFVTQLKGGVSPRCLFFPDTQ 254 Query 181 VEIKKGMNERFRLILSSGNSDFKPGENLAYLKANVAMCGISMNKGYVPTAFHESYARKER 240 VEIKKGMNERFRLILSSGNSDFKPGENLAYLKANVAMCGISMNKGYVPTAFHESYARKER Sbjct 255 VEIKKGMNERFRLILSSGNSDFKPGENLAYLKANVAMCGISMNKGYVPTAFHESYARKER 314 Query 241 ASVIEYLGRYSAVIHHRNEFKPEMLKRDGLSFRFGGKTKLIEKGPLQYEWSETASKVVSV 300 ASVIEYLGRYSAVIHHRNEFKPEMLKRDGLSFRFGGKTKLIEKGPLQYEWSETASKVVSV Sbjct 315 ASVIEYLGRYSAVIHHRNEFKPEMLKRDGLSFRFGGKTKLIEKGPLQYEWSETASKVVSV 374 Query 301 KGTGPPTKEDETISKEVSETLGATEHVVFPTRNVVAQAQ 339 KGTGPPTKEDETISKEVSETLGATEHVVFPTRNVVAQAQ Sbjct 375 KGTGPPTKEDETISKEVSETLGATEHVVFPTRNVVAQAQ 413 >RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprotein M; AltName: Full=M RNA polyprotein; AltName: Full=Middle component RNA polyprotein; AltName: Full=P2; Contains: RecName: Full=VP58; Contains: RecName: Full=Movement protein; Short=MP; Contains: RecName: Full=Large capsid protein; Short=LCP; AltName: Full=42k coat protein; AltName: Full=Coat protein VP42; AltName: Full=L subunit; AltName: Full=Large coat protein; Contains: RecName: Full=Small capsid protein; Short=SCP; AltName: Full=22k coat protein; AltName: Full=Coat protein VP22; AltName: Full=S subunit [Squash mosaic virus (strain melon)] Sequence ID: P36341.3 Length: 1009 Range 1: 119 to 393 Score:203 bits(516), Expect:2e-57, Method:Compositional matrix adjust., Identities:103/276(37%), Positives:159/276(57%), Gaps:6/276(2%) Query 32 IKNQIPSGKALYQNGKSLASMIKSQFQPISKV----LKGGEVKSYNYIPVGSFTAGEHCE 87 + N IP +Y+ KSL S +K ++ L GG + +IP G+ T GE+ Sbjct 119 LSNLIPHSNKMYERSKSLLSGLKRGLIKQKEIAFDKLMGGSTIDFQHIPTGTLTPGENKV 178 Query 88 LAVPIMPEEELAAIVPDSDFALVTKED-NKAKSVHVGAVEIVMECMTSPDCDIYGGAMFV 146 L +PI+P+ L + +D+ K++ N A ++HVGA+E++M+C TSPD +I GG + V Sbjct 179 LDIPIVPQHLLTS-TNITDYHQANKKNANGATALHVGAIEVIMDCFTSPDSNICGGMLLV 237 Query 147 DTFHEDPKNAVRALFVTQLKGGVSPRCLFFPDTQVEIKKGMNERFRLILSSGNSDFKPGE 206 DT H +P NA+R++FV GG R L FPDT VEI MN RF+L+ ++ N D P Sbjct 238 DTAHLNPDNAIRSVFVAPFIGGRPIRVLLFPDTLVEIAPNMNSRFKLLCTTSNGDVAPDF 297 Query 207 NLAYLKANVAMCGISMNKGYVPTAFHESYARKERASVIEYLGRYSAVIHHRNEFKPEMLK 266 NLA +K NVA C +S+ + Y PTA+ E KE+ ++++YL R++ +H N+ E ++ Sbjct 298 NLAMVKVNVAGCAVSLTRTYTPTAYLEQELIKEKGAIVQYLNRHTFSMHRNNQMTKEEMQ 357 Query 267 RDGLSFRFGGKTKLIEKGPLQYEWSETASKVVSVKG 302 + LSFR L EK PL + ++ + V + G Sbjct 358 KQRLSFRLESALTLQEKHPLHATFCKSTNFVYKIGG 393 >RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprotein M; AltName: Full=M RNA polyprotein; AltName: Full=Middle component RNA polyprotein; AltName: Full=P2; Contains: RecName: Full=VP58; AltName: Full=P58; Contains: RecName: Full=Movement protein; Short=MP; Contains: RecName: Full=Large capsid protein; Short=LCP; AltName: Full=Coat protein VP42; AltName: Full=L subunit; AltName: Full=Large coat protein; Contains: RecName: Full=Small capsid protein precursor; AltName: Full=S subunit; Contains: RecName: Full=Mature small capsid protein; Short=SCP; AltName: Full=Coat protein VP22; AltName: Full=Small capsid protein, N-terminus part; AltName: Full=Small coat protein, N-terminus part; Contains: RecName: Full=Small capsid protein C-terminus part; AltName: Full=Small coat protein C-terminus part [Bean-pod mottle virus (strain Kentucky G7)] Sequence ID: P23009.2 Length: 1018 Range 1: 111 to 385 Score:182 bits(462), Expect:4e-50, Method:Compositional matrix adjust., Identities:100/275(36%), Positives:163/275(59%), Gaps:6/275(2%) Query 12 IPANVLEDRAKAYNVS-KMTSIKNQIPSGKALYQNGKSLASMIKSQFQPIS---KVLKGG 67 IPA+VL RA + S+K+QIP+ LY + + I + Q + K+L G Sbjct 111 IPADVLAKRAHEFEKHVAHESLKDQIPAVDKLYSTKVNKFAKIMNLRQSVVGDLKLLTDG 170 Query 68 EVKSYNYIPVGSFTAGEHCELAVPIMPEEE-LAAIVPDSDFALVTKEDN-KAKSVHVGAV 125 ++ +IPV + +AGE+ + +P+M +EE L++ D A+V+K +A ++HVGA+ Sbjct 171 KLYEGKHIPVSNISAGENHVVQIPLMAQEEILSSSASDFKTAMVSKSSKPQATAMHVGAI 230 Query 126 EIVMECMTSPDCDIYGGAMFVDTFHEDPKNAVRALFVTQLKGGVSPRCLFFPDTQVEIKK 185 EI+++ SPDC+I G + VDT+H +P+NAVR++FV +GG R + FP+T V+I+ Sbjct 231 EIIIDSFASPDCNIVGAMLLVDTYHTNPENAVRSIFVAPFRGGRPIRVVTFPNTIVQIEP 290 Query 186 GMNERFRLILSSGNSDFKPGENLAYLKANVAMCGISMNKGYVPTAFHESYARKERASVIE 245 MN RF+L+ ++ N DF G++LA +K NVA + + Y PT ES +K+R ++E Sbjct 291 DMNSRFQLLSTTTNGDFVQGKDLAMVKVNVACAAVGLTSSYTPTPLLESGLQKDRGLIVE 350 Query 246 YLGRYSAVIHHRNEFKPEMLKRDGLSFRFGGKTKL 280 Y GR S V H+ N+ + + L SF +++L Sbjct 351 YFGRMSYVAHNINQPQEKDLLEGNFSFDIKSRSRL 385 >RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprotein M; AltName: Full=M RNA polyprotein; AltName: Full=Middle component RNA polyprotein; AltName: Full=P2; Contains: RecName: Full=VP58; Contains: RecName: Full=Movement protein; Short=MP; AltName: Full=43 kDa protein; Contains: RecName: Full=Large capsid protein; Short=LCP; AltName: Full=Coat protein VP40; AltName: Full=L subunit; AltName: Full=Large coat protein; Contains: RecName: Full=Small capsid protein precursor; AltName: Full=S subunit; Contains: RecName: Full=Mature small capsid protein; Short=SCP; AltName: Full=Coat protein VP22; AltName: Full=Small capsid protein, N-terminus part; AltName: Full=Small coat protein, N-terminus part; Contains: RecName: Full=Small capsid protein C-terminus part; AltName: Full=Small coat protein C-terminus part [Red clover mottle virus] Sequence ID: P13561.1 Length: 996 Range 1: 69 to 387 Score:171 bits(433), Expect:3e-46, Method:Compositional matrix adjust., Identities:104/323(32%), Positives:176/323(54%), Gaps:8/323(2%) Query 2 EMRAEKYLNSIPANVLEDRAKAYN-VSKMTSIKNQIPSGKALYQNG---KSLASMIKSQF 57 +M E IPANVL+++A + S IK+++P+ +LYQN + L + + Sbjct 69 KMAQEILKQGIPANVLQEKANLFKKASANNKIKDEMPNALSLYQNHSFFQKLKHLADKKN 128 Query 58 QPISKVLKGGEVKSYNYIPVGSFTAGEHCELAVPIMPEEELAAIVPDSDFALVTKEDNKA 117 I+ + G EV+ Y ++ G A + + VP++P+ LAA P +D+ T D A Sbjct 129 LDITSLPGGREVE-YKHLDAGHLLADTNVVIDVPLVPQ--LAARTP-TDYNFGTSRDKSA 184 Query 118 KSVHVGAVEIVMECMTSPDCDIYGGAMFVDTFHEDPKNAVRALFVTQLKGGVSPRCLFFP 177 ++HVGA+E+V++ S +CD+ G M VDTFH P+NA+R++++ ++GG+ R L FP Sbjct 185 TALHVGAIEVVIQSYASSECDLMAGMMLVDTFHSRPENAIRSVYIVPIRGGMFMRALCFP 244 Query 178 DTQVEIKKGMNERFRLILSSGNSDFKPGENLAYLKANVAMCGISMNKGYVPTAFHESYAR 237 +T V + +N RF+++ S N+DF G L ++ N+A C S++K YVP+ Sbjct 245 NTLVPMDSDINNRFKVVFSLPNNDFPQGSKLGHVSINMAGCTTSLSKTYVPSPLLTEELG 304 Query 238 KERASVIEYLGRYSAVIHHRNEFKPEMLKRDGLSFRFGGKTKLIEKGPLQYEWSETASKV 297 +E A+VI+YLGR + + N + + R +F GK + + G L S++ S Sbjct 305 REAATVIQYLGRDTYAMQTSNVPTSDEISRMVFNFHMEGKLSMHKTGSLSSILSKSKSLR 364 Query 298 VSVKGTGPPTKEDETISKEVSET 320 ++ G+ P K + E +ET Sbjct 365 YTIGGSKPKNKLADKAHNEEAET 387 >RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprotein M; AltName: Full=M RNA polyprotein; AltName: Full=Middle component RNA polyprotein; AltName: Full=P2; Contains: RecName: Full=VP58; AltName: Full=P58; Contains: RecName: Full=Movement protein; Short=MP; Contains: RecName: Full=Large capsid protein; Short=LCP; AltName: Full=Coat protein VP37; AltName: Full=L subunit; AltName: Full=Large coat protein; Contains: RecName: Full=Small capsid protein precursor; AltName: Full=S subunit; Contains: RecName: Full=Mature small capsid protein; Short=SCP; AltName: Full=Coat protein VP23; AltName: Full=Small capsid protein, N-terminus part; AltName: Full=Small coat protein, N-terminus part; Contains: RecName: Full=Small capsid protein C-terminus part; AltName: Full=Small coat protein C-terminus part [Cowpea severe mosaic virus (strain DG)] Sequence ID: P31630.1 Length: 1002 Range 1: 97 to 376 Score:157 bits(398), Expect:2e-41, Method:Compositional matrix adjust., Identities:95/287(33%), Positives:156/287(54%), Gaps:14/287(4%) Query 1 MEMRAEKYLNS-IPANVLEDRAKAY---NVSKMTSIKNQIPSGKALYQNGKSLASMIKSQ 56 +E EK S IPA++L RA Y N S + +++ +P+ +Y+ ++ + + Sbjct 97 IETTVEKVKQSGIPADILRKRAVDYWKKNNSHNSQMQDVLPNVDEIYEGMRANIAKYLGR 156 Query 57 FQPISKVLKGGEVKSYN--YIPVGSFTAGEHCELAVPIMPEEELAAIVPDSDFALVTKED 114 ++ + K G+ K Y IP+ + + + VPI EE V +SD+ T+E Sbjct 157 SSTVTSIAKLGKCKVYRKKNIPLANLPSLQTS--CVPITLTEE---SVGNSDYT--TEET 209 Query 115 N-KAKSVHVGAVEIVMECMTSPDCDIYGGAMFVDTFHEDPKNAVRALFVTQLKGGVSPRC 173 N + KS+HVGA+EIVM S DC+I GG + +DT H D NA+R++FV ++GG R Sbjct 210 NSEVKSLHVGAIEIVMNSFASSDCNILGGFLLIDTCHTDINNAIRSIFVAPMRGGRPIRM 269 Query 174 LFFPDTQVEIKKGMNERFRLILSSGNSDFKPGENLAYLKANVAMCGISMNKGYVPTAFHE 233 + FPDT V+I+ MN+RF+L+ ++ N DF G +LA + NV ++ Y PT ++E Sbjct 270 ISFPDTLVQIEPNMNKRFQLLCTTSNGDFMQGRDLAMMHVNVLAHAVTHTSTYTPTPYYE 329 Query 234 SYARKERASVIEYLGRYSAVIHHRNEFKPEMLKRDGLSFRFGGKTKL 280 +E+ ++EYL R + +H++N + L F F G+ L Sbjct 330 KILSREKGFIVEYLNRMTYAVHNQNHPTEKDLLESDFQFDFEGQPVL 376 >RecName: Full=RNA2 polyprotein; AltName: Full=Genome polyprotein M; AltName: Full=M RNA polyprotein; AltName: Full=Middle component RNA polyprotein; AltName: Full=P2; Contains: RecName: Full=VP58; AltName: Full=P58; Contains: RecName: Full=Movement protein; Short=MP; AltName: Full=48 kDa protein; Contains: RecName: Full=Large capsid protein; Short=LCP; AltName: Full=Coat protein VP37; AltName: Full=L subunit; AltName: Full=Large coat protein; Contains: RecName: Full=Small capsid protein precursor; AltName: Full=S subunit; Contains: RecName: Full=Mature small capsid protein; Short=SCP; AltName: Full=Coat protein VP23; AltName: Full=Small capsid protein, N-terminus part; AltName: Full=Small coat protein, N-terminus part; Contains: RecName: Full=Small capsid protein C-terminus part; AltName: Full=Small coat protein C-terminus part [Cowpea mosaic virus strain SB] Sequence ID: P03599.1 Length: 1046 Range 1: 126 to 385 Score:115 bits(289), Expect:3e-27, Method:Compositional matrix adjust., Identities:82/267(31%), Positives:140/267(52%), Gaps:11/267(4%) Query 12 IPANVLEDRAKAYNVSKMTS--IKNQIPSGKALYQNGKSLASMIKSQFQPISKVLKGGEV 69 IP+ +LE++A + +K + +K++IP + +Y + S ++++ Q + K Sbjct 126 IPSGILEEKAIQFKRAKEGNKPLKDEIPKPEDMYVSHTSKWNVLRKMSQKTVDLSKAAAG 185 Query 70 KSY--NYIPVGSFTAGEHCELAVPIMPEEELAAIVPDSDFALVTKEDNKAKSVHVGAVEI 127 + ++ G+ A L +P+ ++ LA SDF + KE+ K ++H+GA+EI Sbjct 186 MGFINKHMLTGNILAQPTTVLDIPVTKDKTLAMA---SDF--IRKENLKTSAIHIGAIEI 240 Query 128 VMECMTSPDCDIYGGAMFVDTFHEDPKNAVRALFVTQLKGGVSPRCLFFPDTQVEIKKGM 187 +++ SP+ D+ GG + VD+ H D NA+R++FV ++GG R + FP+T + + Sbjct 241 IIQSFASPESDLMGGFLLVDSLHTDTANAIRSIFVAPMRGGRPVRVVTFPNTLAPVSCDL 300 Query 188 NERFRLILSSGNSDFKPGENLAYLKANVAMCGISMNKGYVPTAFHESYARKERASVIEYL 247 N RF+LI S N D G +A + NVA C S+ K + P+ + KE A V+EYL Sbjct 301 NNRFKLICSLPNCDIVQGSQVAEVSVNVAGCATSIEKSHTPSQLYTEEFEKEGAVVVEYL 360 Query 248 GRYSAVIHHRNEFKPEMLKRDGLSFRF 274 GR + N E L+ L F F Sbjct 361 GRQTYCAQPSNLPTEEKLR--SLKFDF 385